STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIFM1Apoptosis inducing factor mitochondria associated 1. (625 aa)    
Predicted Functional Partners:
LOC102359041
Zgc:153993.
     
 0.926
BAX
Uncharacterized protein.
     
 0.922
MACROH2A2
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
  
 0.912
LOC102346364
Histone H2A; Belongs to the histone H2A family.
    
 0.904
H3B8N0_LATCH
Histone H2A; Belongs to the histone H2A family.
    
 0.904
H2AX
Histone H2A; Belongs to the histone H2A family.
    
 0.904
LOC102345261
Histone H2A; Belongs to the histone H2A family.
    
 0.903
H2AZ2
Histone H2A; Belongs to the histone H2A family.
     
  0.900
SUOX
Sulfite oxidase.
   
 0.772
EXOG
Exo/endonuclease G.
    
 
 0.718
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.