STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZVB4_LATCHUncharacterized protein. (436 aa)    
Predicted Functional Partners:
CRBN
Cereblon.
    
 
 0.961
ZNF598
Zinc finger protein 598.
      
 0.575
PAK1IP1
PAK1 interacting protein 1.
      
 0.542
DDB1
Damage specific DNA binding protein 1.
    
 0.542
FAM83C
Family with sequence similarity 83 member C.
    
 
 0.471
ANKRD17
Ankyrin repeat domain 17.
    
 0.463
FBXW2
F-box and WD repeat domain containing 2.
    
 
 0.453
FAM83E
Family with sequence similarity 83 member E.
      
 0.451
RBX1
Ring-box 1.
     
 0.446
FAM83H
Family with sequence similarity 83 member H.
      
 0.445
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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