Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZVB4_LATCHUncharacterized protein. (436 aa)    
Predicted Functional Partners:
CRBN
Cereblon.
    
 
 0.987
FAM83C
Family with sequence similarity 83 member C.
    
 
 0.684
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.683
UBR7
Ubiquitin protein ligase E3 component n-recognin 7.
      
 0.661
LOC102349920
Uncharacterized protein.
    
  0.657
DDB1
Damage specific DNA binding protein 1.
    
 0.657
QRICH1
Glutamine rich 1.
    
   0.641
PAK1IP1
PAK1 interacting protein 1.
      
 0.641
ZNF598
Zinc finger protein 598.
      
 0.641
ANKRD17
Ankyrin repeat domain 17.
    
 0.633
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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