STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTX1Deltex E3 ubiquitin ligase 1. (322 aa)    
Predicted Functional Partners:
LOC102353790
Uncharacterized protein.
    
 0.944
NOTCH3
Notch receptor 3.
    
 0.944
LOC102357987
Uncharacterized protein.
    
 0.944
NOTCH2
Notch receptor 2.
    
 0.925
LOC102363052
Si:dkey-3h3.3.
  
 
0.919
DTX3
Deltex E3 ubiquitin ligase 3.
  
  
0.918
WWP1
E3 ubiquitin-protein ligase.
    
 0.683
WWP2
E3 ubiquitin-protein ligase.
    
 0.683
ITCH
E3 ubiquitin-protein ligase.
    
 0.683
RPS27A
Ribosomal protein S27a.
    
  0.594
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.