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DUS3L protein (Latimeria chalumnae) - STRING interaction network
"DUS3L" - Dihydrouridine synthase 3-like in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUS3LDihydrouridine synthase 3-like (702 aa)    
Predicted Functional Partners:
GMPS
Guanine monphosphate synthetase (683 aa)
   
   
  0.606
EPRS
glutamyl-prolyl-tRNA synthetase (1965 aa)
   
  0.588
BOP1
Block of proliferation 1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome (760 aa)
     
   
  0.574
IMPAD1
Inositol monophosphatase domain containing 1 (350 aa)
       
 
  0.527
TMEM177
Transmembrane protein 177 (311 aa)
     
   
  0.510
TMEM87B
Transmembrane protein 87B (401 aa)
     
   
  0.509
TMEM87A
Transmembrane protein 87A (508 aa)
     
   
  0.509
ENSLACG00000004169
Uncharacterized protein (590 aa)
     
   
  0.509
STK11IP
Serine/threonine kinase 11 interacting protein (1075 aa)
           
  0.508
ENSLACG00000014248
Uncharacterized protein (134 aa)
           
  0.508
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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