STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLIM3Actin binding LIM protein family member 3. (551 aa)    
Predicted Functional Partners:
SAMD8
Sterile alpha motif domain containing 8.
      
 0.697
RAB34
RAB34, member RAS oncogene family.
      
 0.679
AP3M1
Adaptor related protein complex 3 subunit mu 1.
      
 0.651
ADD3
Adducin 3.
   
 0.644
ADD1
Adducin 1.
   
 0.644
ADD2
Adducin 2.
   
 0.644
CYBC1
Cytochrome b-245 chaperone 1.
      
 0.641
AFAP1L1
Actin filament associated protein 1 like 1.
   
  
 0.594
KIF5B
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.593
ARHGEF39
Rho guanine nucleotide exchange factor (GEF) 39.
      
 0.572
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.