STRINGSTRING
ABLIM3 protein (Latimeria chalumnae) - STRING interaction network
"ABLIM3" - Actin binding LIM protein family, member 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLIM3Actin binding LIM protein family, member 3 (551 aa)    
Predicted Functional Partners:
ABRA
Actin binding Rho activating protein (383 aa)
       
 
  0.611
DUSP28
Dual specificity phosphatase 28 (161 aa)
     
   
  0.559
LIMD2
LIM domain containing 2 (128 aa)
           
  0.513
PPM1L
Protein phosphatase, Mg2+/Mn2+ dependent, 1L (360 aa)
     
   
  0.498
NEO1
Neogenin 1 (690 aa)
         
  0.460
DCC
Deleted in colorectal carcinoma (137 aa)
         
  0.460
IGDCC3
Immunoglobulin superfamily, DCC subclass, member 3 (654 aa)
         
  0.454
ENSLACG00000014491
Uncharacterized protein (575 aa)
         
  0.454
SDK2
Sidekick cell adhesion molecule 2 (2107 aa)
         
  0.449
NTN1
Netrin 1 (604 aa)
     
 
  0.424
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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