STRINGSTRING
PRRC2A protein (Latimeria chalumnae) - STRING interaction network
"PRRC2A" - Proline-rich coiled-coil 2A in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRC2AProline-rich coiled-coil 2A (1714 aa)    
Predicted Functional Partners:
BAG6
BCL2-associated athanogene 6 (995 aa)
     
   
  0.680
EIF3H
Eukaryotic translation initiation factor 3, subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (337 aa)
       
      0.590
ATP6V0A1
ATPase, H+ transporting, lysosomal V0 subunit a1; Essential component of the vacuolar proton pump (V- ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase (840 aa)
           
  0.545
INO80
INO80 homolog (S. cerevisiae) (1542 aa)
     
   
  0.457
EPN1
Epsin 1 (513 aa)
     
   
  0.439
ENSLACG00000001148
Uncharacterized protein (90 aa)
     
   
  0.439
EIF3F
Eukaryotic translation initiation factor 3, subunit F (227 aa)
       
      0.434
MMGT1
Membrane magnesium transporter 1 (131 aa)
           
  0.412
DUSP7
Dual specificity phosphatase 7 (379 aa)
           
  0.410
EIF2B4
Eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa (533 aa)
           
  0.406
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (13%) [HD]