Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZVE0_LATCHUncharacterized protein. (345 aa)    
Predicted Functional Partners:
H2ZYV0_LATCH
CCHC-type domain-containing protein.
 
      0.900
BCLAF3
BCLAF1 and THRAP3 family member 3.
      
 0.641
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
  
 0.599
MTREX
Mtr4 exosome RNA helicase.
   
 0.568
CCDC9
Coiled-coil domain containing 9.
   
  
 0.522
TENT4B
Terminal nucleotidyltransferase 4B.
   
 0.500
H3AMG4_LATCH
Uncharacterized protein.
    
 
 0.499
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 
 0.499
CD99L2
CD99 molecule like 2.
      
 0.498
NKAPD1
Zgc:162339.
      
 0.498
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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