STRINGSTRING
HTR1F protein (Latimeria chalumnae) - STRING interaction network
"HTR1F" - 5-hydroxytryptamine in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR1F5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled (365 aa)    
Predicted Functional Partners:
HTR1A
5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled (410 aa)
     
0.593
NPY
Neuropeptide Y (100 aa)
     
  0.591
GNG2
Guanine nucleotide binding protein (G protein), gamma 2; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein- effector interaction (71 aa)
       
  0.588
GNAI2
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 (355 aa)
       
    0.587
POMC
Proopiomelanocortin (255 aa)
     
  0.578
CXCL12
Chemokine (C-X-C motif) ligand 12 (95 aa)
       
    0.576
S1PR3
Sphingosine-1-phosphate receptor 3 (375 aa)
       
  0.568
ENSLACG00000003802
Uncharacterized protein (381 aa)
       
0.564
S1PR1
Sphingosine-1-phosphate receptor 1 (381 aa)
       
0.564
NPB
Neuropeptide B (131 aa)
     
  0.560
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (13%) [HD]