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STRINGSTRING
SEPSECS protein (Latimeria chalumnae) - STRING interaction network
"SEPSECS" - O-phosphoseryl-tRNA(Sec) selenium transferase in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPSECSO-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis (492 aa)    
Predicted Functional Partners:
PSTK
phosphoseryl-tRNA kinase (350 aa)
     
 
  0.992
SEPHS1
Selenophosphate synthetase 1 (392 aa)
     
 
  0.982
SEPHS2
Selenophosphate synthetase 2 (338 aa)
     
 
  0.964
TRNAU1AP
tRNA selenocysteine 1 associated protein 1 (286 aa)
     
   
  0.921
SARS2
seryl-tRNA synthetase 2, mitochondrial (499 aa)
   
   
  0.798
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA-specific (515 aa)
   
   
  0.750
YARS
Tyrosine--tRNA ligase; tyrosyl-tRNA synthetase (528 aa)
   
   
  0.727
KANK1
KN motif and ankyrin repeat domains 1 (1193 aa)
           
  0.667
AARS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain (968 aa)
   
   
  0.661
SECISBP2
SECIS binding protein 2 (526 aa)
     
   
  0.658
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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