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NXF1 protein (Latimeria chalumnae) - STRING interaction network
"NXF1" - Nuclear RNA export factor 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXF1Nuclear RNA export factor 1 (628 aa)    
Predicted Functional Partners:
NXT2
Nuclear transport factor 2-like export factor 2 (143 aa)
     
  0.998
RAE1
RAE1 RNA export 1 homolog (S. pombe) (394 aa)
     
  0.996
ALYREF
Aly/REF export factor (258 aa)
     
  0.993
NUP107
Nucleoporin 107kDa (930 aa)
     
  0.982
KPNB1
Karyopherin (importin) beta 1 (777 aa)
     
 
  0.970
NUP93
Nucleoporin 93kDa (722 aa)
     
  0.967
SEH1L
SEH1-like (S. cerevisiae) (468 aa)
     
  0.958
NUP62CL
Nucleoporin 62kDa C-terminal like (555 aa)
     
  0.956
NUP133
Nucleoporin 133kDa (1421 aa)
     
  0.956
NUP98
Nucleoporin 98kDa (1790 aa)
     
  0.951
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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