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NXF1 protein (Latimeria chalumnae) - STRING interaction network
"NXF1" - Zgc:153681 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXF1Zgc-153681; Nuclear RNA export factor 1 (628 aa)    
Predicted Functional Partners:
ALYREF
Aly/REF export factor (258 aa)
     
  0.995
NXT2
Nuclear transport factor 2-like export factor 2 (143 aa)
     
  0.994
UPF3B
UPF3B, regulator of nonsense mediated mRNA decay; UPF3 regulator of nonsense transcripts homolog B (yeast) (470 aa)
     
  0.989
THOC5
THO complex 5 (734 aa)
     
  0.959
RAE1
Ribonucleic acid export 1 (394 aa)
     
 
  0.951
UPF1
Uncharacterized protein; UPF1 regulator of nonsense transcripts homolog (yeast) (697 aa)
     
 
  0.949
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs (177 aa)
     
 
  0.949
UPF3A
Uncharacterized protein; UPF3 regulator of nonsense transcripts homolog A (yeast) (332 aa)
     
 
  0.948
MCM3AP
MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) associated protein (1957 aa)
     
 
  0.938
NCBP1
Nuclear cap binding protein subunit 1, 80kDa (804 aa)
     
 
  0.931
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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