Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC11Thioredoxin domain containing 11. (738 aa)    
Predicted Functional Partners:
EDEM2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.983
LOC102345487
Dual oxidase 2.
     
 0.933
FBLN7
Fibulin 7.
    
  0.907
H3AR79_LATCH
Uncharacterized protein.
    
  0.907
ANKRD45
ANK_REP_REGION domain-containing protein.
   
 0.830
HSPA5
Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.
   
 0.830
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
   
  
 0.807
UGGT1
UDP-glucose glycoprotein glucosyltransferase 1.
   
 
 0.780
TUSC3
Tumor suppressor candidate 3.
   
 
 0.779
CPPED1
Metallophos domain-containing protein.
     
 0.776
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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