Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102367052Uncharacterized protein. (446 aa)    
Predicted Functional Partners:
LOC102351101
Uncharacterized protein.
 
     0.919
HSPG2
Heparan sulfate proteoglycan 2.
   
 0.837
LAMA4
Laminin subunit alpha 4.
   
 0.805
LAMC1
Laminin subunit gamma 1.
   
 0.737
LAMC3
Laminin subunit gamma 3.
   
 0.737
H2ZXM4_LATCH
EGF-like domain-containing protein.
 
   
0.729
LAMA5
Laminin subunit alpha 5.
   
 0.711
LAMA3
Laminin subunit alpha 3.
   
 0.711
TNFAIP6
TNF alpha induced protein 6.
     
 0.653
LAMC2
Uncharacterized protein.
   
 0.635
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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