STRINGSTRING
ITGB8 protein (Latimeria chalumnae) - STRING interaction network
"ITGB8" - Integrin, beta 8 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGB8Integrin, beta 8 (637 aa)    
Predicted Functional Partners:
TLN2
Talin 2 (1962 aa)
     
  0.959
TLN1
Talin 1 (2546 aa)
     
  0.959
FLNB
Filamin B, beta (2605 aa)
     
    0.945
FLNC
Filamin C, gamma (2664 aa)
     
    0.945
FLNA
Filamin A, alpha (2637 aa)
     
    0.945
ITGA9
Integrin, alpha 9 (480 aa)
     
  0.941
ITGA8
Integrin, alpha 8 (1048 aa)
     
  0.941
ENSLACG00000000563
Uncharacterized protein (175 aa)
     
  0.941
ITGAV
Integrin, alpha V (597 aa)
     
  0.941
ITGA7
Integrin, alpha 7 (1029 aa)
     
  0.937
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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