STRINGSTRING
ENSLACG00000001247 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001247" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001247Uncharacterized protein (271 aa)    
Predicted Functional Partners:
DOCK1
Dedicator of cytokinesis 1 (873 aa)
     
  0.980
PXN
Paxillin (1112 aa)
       
  0.971
BCAR1
Breast cancer anti-estrogen resistance 1 (914 aa)
       
  0.969
RAPGEF1
Rap guanine nucleotide exchange factor (GEF) 1 (1217 aa)
     
  0.963
ABL2
V-abl Abelson murine leukemia viral oncogene homolog 2 (1175 aa)
     
0.933
ABL1
C-abl oncogene 1, non-receptor tyrosine kinase (1156 aa)
     
0.933
PTK2
PTK2 protein tyrosine kinase 2 (673 aa)
     
  0.915
CRK
V-crk sarcoma virus CT10 oncogene homolog (avian) (310 aa)
     
0.913
DOCK2
Dedicator of cytokinesis 2 (1830 aa)
     
  0.908
DOCK3
Dedicator of cytokinesis 3 (1648 aa)
     
  0.908
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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