STRINGSTRING
RRP8 protein (Latimeria chalumnae) - STRING interaction network
"RRP8" - Ribosomal RNA processing 8, methyltransferase, homolog in Latimeria chalumnae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP8Ribosomal RNA processing 8, methyltransferase, homolog (yeast) (469 aa)    
Predicted Functional Partners:
RBM28
RNA binding motif protein 28 (559 aa)
     
   
  0.868
UTP11L
UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast); Involved in nucleolar processing of pre-18S ribosomal RNA (254 aa)
     
      0.815
DDX56
DEAD (Asp-Glu-Ala-Asp) box helicase 56 (565 aa)
     
   
  0.812
RPF2
Ribosome production factor 2 homolog (S. cerevisiae) (309 aa)
     
        0.810
PES1
Pescadillo ribosomal biogenesis factor 1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome (584 aa)
     
        0.805
ENSLACG00000017332
Uncharacterized protein (744 aa)
     
        0.804
EBNA1BP2
EBNA1 binding protein 2 (146 aa)
     
        0.801
UTP3
UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) (496 aa)
     
        0.800
GNL3L
Guanine nucleotide binding protein-like 3 (nucleolar)-like (331 aa)
     
      0.737
GNL3
Guanine nucleotide binding protein-like 3 (nucleolar) (564 aa)
     
      0.737
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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