Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TECTATectorin alpha. (2122 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.746
TBCEL
Tubulin folding cofactor E-like b.
 
    
 0.725
TIPRL
TOR signaling pathway regulator.
   
 
 0.712
CBLN2
Cerebellin 2 precursor.
     
 0.700
H3BHD2_LATCH
C1q domain-containing protein.
      
 0.684
COCH
Cochlin.
     
 0.645
OTOP1
Otopetrin 1.
      
 0.641
CBLN4
Cerebellin 4 precursor.
      
 0.641
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
  0.634
CEBPG
CCAAT enhancer binding protein gamma.
      
 0.613
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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