STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOT2Aspartate aminotransferase. (392 aa)    
Predicted Functional Partners:
MDH2
Malate dehydrogenase.
   
 0.999
LOC102361787
Aminotran_1_2 domain-containing protein.
   
 0.986
H2ZXP4_LATCH
Uncharacterized protein.
   
 0.986
MDH1
Malate dehydrogenase.
   
 0.983
LDHB
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.982
GLUD1
Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.980
SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.978
LOC102363309
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.973
LOC102364955
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.971
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
  
0.970
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.