STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102361851Paraoxonase 1. (364 aa)    
Predicted Functional Partners:
NFYC
Nuclear transcription factor Y subunit gamma.
    
   0.902
HDGFL3
HDGF like 3.
      
 0.559
SRRD
SRR1 domain containing.
      
 0.557
GRAMD2B
GRAM domain containing 2B.
      
 0.552
LRIG2
Leucine rich repeats and immunoglobulin like domains 2.
    
 
 0.543
APOF
Uncharacterized protein.
      
 0.457
DHX40
DEAH-box helicase 40.
      
 0.453
RNF130
Ring finger protein 130.
    
   0.449
CHRAC1
Chromatin accessibility complex subunit 1.
    
   0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.