STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZVI8_LATCHDUF4592 domain-containing protein. (616 aa)    
Predicted Functional Partners:
H2ZT48_LATCH
Uncharacterized protein.
   
 0.666
CRACD
KIAA1211.
   
 0.666
FANCM
FA complementation group M.
    
 0.605
MUS81
Uncharacterized protein.
    
 0.546
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.538
DDX20
DEAD-box helicase 20.
   
 0.531
LOC102361814
Tudor domain-containing protein.
    
 0.505
UBXN7
UBX domain-containing protein 7.
     
 0.494
POLD1
DNA polymerase.
    
 0.490
H2ZWI5_LATCH
Uncharacterized protein.
     
 0.467
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.