Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZVJ2_LATCHLigand dependent nuclear receptor corepressor. (566 aa)    
Predicted Functional Partners:
LCOR
Ligand dependent nuclear receptor corepressor.
 
      0.849
H3BE59_LATCH
Uncharacterized protein.
 
      0.824
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 
 0.765
MTF2
Metal response element binding transcription factor 2.
    
 
 0.753
PHF19
PHD finger protein 19.
    
 
 0.700
PHF1
PHD finger protein 1.
    
 
 0.677
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 
 0.614
GHSR
Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.587
CDX1
Caudal type homeobox 1a.
      
 0.587
AEBP2
AE binding protein 2.
    
 
 0.565
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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