STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCG2Secretogranin II. (621 aa)    
Predicted Functional Partners:
CHGB
Uncharacterized protein.
   
  
 0.973
SCG3
Secretogranin III.
   
 
 0.848
SCG5
Secretogranin V.
   
  
 0.846
VGF
VGF nerve growth factor inducible.
   
  
 0.773
RLN3
Relaxin 3b.
      
 0.740
PCSK1
Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family.
   
  
 0.662
ACBD7
Acyl-CoA binding domain containing 7.
      
 0.659
LOC102352758
KISS1 receptor a.
      
 0.658
CBLN2
Cerebellin 2 precursor.
      
 0.654
ADCYAP1
Adenylate cyclase activating polypeptide 1.
   
  
 0.650
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.