SCG2 protein (Latimeria chalumnae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SCG2

Secretogranin II. (621 aa)

Predicted Functional Partners:

CHGB

0.951

VGF

0.706

NOS1AP

0.702

LOC102352758

0.668

RLN3

0.651

SCG3

0.610

SCG5

0.601

GNAS

0.585

PDYN

0.570

VSTM2A

0.559

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHGB	GNAS	ENSLACP00000018800	ENSLACP00000015123	Uncharacterized protein.	GNAS complex locus.	0.578
CHGB	PDYN	ENSLACP00000018800	ENSLACP00000000398	Uncharacterized protein.	Prodynorphin.	0.584
CHGB	RLN3	ENSLACP00000018800	ENSLACP00000003500	Uncharacterized protein.	Relaxin 3b.	0.425
CHGB	SCG2	ENSLACP00000018800	ENSLACP00000001414	Uncharacterized protein.	Secretogranin II.	0.951
CHGB	SCG3	ENSLACP00000018800	ENSLACP00000007414	Uncharacterized protein.	Secretogranin III.	0.649
CHGB	SCG5	ENSLACP00000018800	ENSLACP00000007363	Uncharacterized protein.	Secretogranin V.	0.605
CHGB	VGF	ENSLACP00000018800	ENSLACP00000007686	Uncharacterized protein.	VGF nerve growth factor inducible.	0.721
CHGB	VSTM2A	ENSLACP00000018800	ENSLACP00000005412	Uncharacterized protein.	V-set and transmembrane domain containing 2A.	0.575
GNAS	CHGB	ENSLACP00000015123	ENSLACP00000018800	GNAS complex locus.	Uncharacterized protein.	0.578
GNAS	RLN3	ENSLACP00000015123	ENSLACP00000003500	GNAS complex locus.	Relaxin 3b.	0.416
GNAS	SCG2	ENSLACP00000015123	ENSLACP00000001414	GNAS complex locus.	Secretogranin II.	0.585
GNAS	VGF	ENSLACP00000015123	ENSLACP00000007686	GNAS complex locus.	VGF nerve growth factor inducible.	0.509
GNAS	VSTM2A	ENSLACP00000015123	ENSLACP00000005412	GNAS complex locus.	V-set and transmembrane domain containing 2A.	0.403
LOC102352758	SCG2	ENSLACP00000019382	ENSLACP00000001414	KISS1 receptor a.	Secretogranin II.	0.668
NOS1AP	SCG2	ENSLACP00000016593	ENSLACP00000001414	Uncharacterized protein.	Secretogranin II.	0.702
PDYN	CHGB	ENSLACP00000000398	ENSLACP00000018800	Prodynorphin.	Uncharacterized protein.	0.584
PDYN	RLN3	ENSLACP00000000398	ENSLACP00000003500	Prodynorphin.	Relaxin 3b.	0.437
PDYN	SCG2	ENSLACP00000000398	ENSLACP00000001414	Prodynorphin.	Secretogranin II.	0.570
PDYN	VGF	ENSLACP00000000398	ENSLACP00000007686	Prodynorphin.	VGF nerve growth factor inducible.	0.442
PDYN	VSTM2A	ENSLACP00000000398	ENSLACP00000005412	Prodynorphin.	V-set and transmembrane domain containing 2A.	0.588