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STRINGSTRING
SCG2 protein (Latimeria chalumnae) - STRING interaction network
"SCG2" - Secretogranin II (chromogranin C) a in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG2Secretogranin II (chromogranin C) a (621 aa)    
Predicted Functional Partners:
SCG5
Secretogranin V (207 aa)
     
   
  0.864
SCG3
Secretogranin III (476 aa)
     
   
  0.859
CHGA
Chromogranin A (parathyroid secretory protein 1) (441 aa)
     
   
  0.831
CPE
Carboxypeptidase E (469 aa)
     
   
  0.678
VGF
Uncharacterized protein; VGF nerve growth factor inducible (438 aa)
     
   
  0.633
GNRH1
Gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) (94 aa)
     
   
  0.606
PENK
Proenkephalin a (268 aa)
     
   
  0.592
ENSLACG00000006483
GNAS complex locus (354 aa)
     
   
  0.582
CBLN1
Cerebellin 1 precursor (189 aa)
     
   
  0.571
ENSLACG00000005918
Proprotein convertase subtilisin/kexin type 1 inhibitor, like (292 aa)
     
   
  0.568
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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