Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRPRGastrin releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family. (388 aa)    
Predicted Functional Partners:
GRP
Gastrin-releasing peptide.
   
 0.985
BRS3
Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.951
NMBR
Neuromedin B receptor; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.931
SEC11C
Signal peptidase complex catalytic subunit SEC11.
   
 0.863
SEC11A
Signal peptidase complex catalytic subunit SEC11.
   
 0.863
LOC102359416
Uncharacterized protein.
    
 0.815
GNA11
G protein subunit alpha 11.
    
 0.815
KTI12
KTI12 chromatin associated homolog.
    
 0.751
CLTRN
Collectrin domain-containing protein.
    
 
 0.724
CCK
Cholecystokinin.
    
 0.716
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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