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STRINGSTRING
CDC73 protein (Latimeria chalumnae) - STRING interaction network
"CDC73" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC73Uncharacterized protein; Cell division cycle 73 (316 aa)    
Predicted Functional Partners:
LEO1
Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (674 aa)
     
 
  0.989
CTR9
Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (1163 aa)
     
 
  0.988
RTF1
Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (528 aa)
     
 
  0.982
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component; Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) (530 aa)
     
 
  0.971
ENSLACG00000010943
WD repeat domain 61 (291 aa)
     
 
  0.917
WDR61
WD repeat domain 61 (305 aa)
     
 
  0.917
CDC5L
Cell division cycle 5-like (803 aa)
     
      0.906
SSRP1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (584 aa)
     
 
  0.874
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit; Suppressor of Ty 16 homolog (S. cerevisiae) (1044 aa)
     
 
  0.866
SUPT5H
Transcription elongation factor SPT5; Suppressor of Ty 5 homolog (S. cerevisiae) (1081 aa)
     
 
  0.855
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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