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KCNIP3 protein (Latimeria chalumnae) - STRING interaction network
"KCNIP3" - Kv channel interacting protein 3, calsenilin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNIP3Kv channel interacting protein 3, calsenilin (213 aa)    
Predicted Functional Partners:
KCND1
Potassium voltage-gated channel, Shal-related subfamily, member 1 (636 aa)
     
  0.956
NOS2
Nitric oxide synthase 2, inducible (1126 aa)
     
  0.944
NOS1
Nitric oxide synthase 1 (neuronal) (1476 aa)
     
  0.927
KCND3
Potassium channel, voltage gated Shal related subfamily D, member 3 (320 aa)
     
  0.910
KCND2
Potassium channel, voltage gated Shal related subfamily D, member 2 (371 aa)
     
  0.910
PI4KB
Phosphatidylinositol 4-kinase, catalytic, beta (786 aa)
     
 
  0.808
MYO16
Myosin XVI (786 aa)
     
  0.768
CACNA1I
Calcium channel, voltage-dependent, T type, alpha 1I subunit (1831 aa)
       
 
  0.694
KXD1
Ubiquitin A-52 residue ribosomal protein fusion product 1 (231 aa)
     
  0.674
UBA52
Uncharacterized protein (128 aa)
     
  0.674
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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