STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (145 aa)    
Predicted Functional Partners:
ATG7
Autophagy related 7.
    
 0.999
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.999
ATG10
Autophagy related 10.
    
 0.999
ATG3
Autophagy-related protein 3.
    
 0.999
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.998
ATG16L1
Autophagy related 16 like 1.
    
 0.997
ATG16L2
ATG16 autophagy related 16-like 2 (S. cerevisiae).
    
 0.996
LOC102348211
ATG16 domain-containing protein.
    
 0.992
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.991
BECN1
Beclin 1, autophagy related.
   
 0.991
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.