Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXQ1Forkhead box Q1. (329 aa)    
Predicted Functional Partners:
H3BCG1_LATCH
SET domain-containing protein.
    
 0.646
CRAMP1
Cramped chromatin regulator homolog 1.
    
 0.615
NCOA7
Nuclear receptor coactivator 7.
      
 0.613
GMDS
GDP-mannose 4,6-dehydratase.
      
 0.599
LOC102345588
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1; Belongs to the 3-beta-HSD family.
      
 0.591
WNT9B
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.586
WNT9A
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.586
LOC102352665
Hippocalcin like 4.
    
 
 0.536
GFRAL
GDNF family receptor alpha like.
      
 0.526
RFX2
Regulatory factor X2.
    
 
 0.518
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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