STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXQ1Forkhead box Q1. (329 aa)    
Predicted Functional Partners:
NCOA7
Nuclear receptor coactivator 7.
   
  
 0.562
GFRAL
GDNF family receptor alpha like.
      
 0.557
LOC102352665
Hippocalcin like 4.
    
 
 0.549
RFX2
Regulatory factor X2.
    
 
 0.528
NFE2L1
Nuclear factor, erythroid 2 like 1.
      
 0.503
GATA2
GATA binding protein 2.
   
 0.461
CRAMP1
Cramped chromatin regulator homolog 1.
    
 
 0.445
CREM
cAMP responsive element modulator.
    
 
 0.437
KLF9
Kruppel like factor 9.
    
 0.436
KLF6
Kruppel like factor 6.
    
 0.432
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.