STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLITRK3SLIT and NTRK like family member 3. (883 aa)    
Predicted Functional Partners:
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.944
D2HGDH
D-2-hydroxyglutarate dehydrogenase.
      
 0.869
TRA2B
Transformer 2 beta homolog.
    
 
 0.851
MELTF
Melanotransferrin; Belongs to the transferrin family.
    
 
 0.721
UNC5B
Unc-5 netrin receptor B.
    
 0.607
PAK2
Non-specific serine/threonine protein kinase.
    
  0.591
ABI1
Abl interactor 1.
     
  0.578
BAIAP2L1
BAI1 associated protein 2 like 1.
     
  0.578
H3AXK0_LATCH
Uncharacterized protein.
     
  0.578
VAMP3
Vesicle associated membrane protein 3.
     
  0.571
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.