STRINGSTRING
STXBP1 protein (Latimeria chalumnae) - STRING interaction network
"STXBP1" - Syntaxin binding protein 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STXBP1Syntaxin binding protein 1 (602 aa)    
Predicted Functional Partners:
STX1A
Syntaxin 1A (brain) (290 aa)
     
  0.939
STX1B
Syntaxin 1B (283 aa)
     
  0.939
STX2
Syntaxin 2 (277 aa)
     
  0.928
STX3
Syntaxin 3 (274 aa)
     
  0.928
SNAP25
Synaptosomal-associated protein, 25kDa (206 aa)
     
  0.927
STX5
Syntaxin 5 (350 aa)
     
  0.903
STX11
Syntaxin 11 (285 aa)
     
  0.889
ENSLACG00000013510
Uncharacterized protein (293 aa)
     
  0.889
STX19
Syntaxin 19 (293 aa)
     
  0.889
STX4
Syntaxin 4 (242 aa)
     
  0.889
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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