STRINGSTRING
ATF3 protein (Latimeria chalumnae) - STRING interaction network
"ATF3" - Activating transcription factor 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATF3Activating transcription factor 3 (179 aa)    
Predicted Functional Partners:
JUN
Jun proto-oncogene (311 aa)
     
  0.897
JUNB
Jun B proto-oncogene (311 aa)
     
  0.892
JUND
Jun D proto-oncogene (293 aa)
     
  0.887
ENSLACG00000006733
Uncharacterized protein (316 aa)
     
  0.868
ATF4
Activating transcription factor 4 (tax-responsive enhancer element B67) (374 aa)
     
  0.814
MAPK4
Mitogen-activated protein kinase 4 (578 aa)
       
  0.762
ENSLACG00000016263
Uncharacterized protein (103 aa)
       
  0.762
ENSLACG00000016060
Uncharacterized protein (82 aa)
       
  0.762
ENSLACG00000015773
Uncharacterized protein (210 aa)
       
  0.762
MAPK11
Mitogen-activated protein kinase 11 (361 aa)
       
  0.762
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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