Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZVR1_LATCHUncharacterized protein. (167 aa)    
Predicted Functional Partners:
LOC102358196
Uncharacterized protein.
   
 
 0.790
AMBP
Alpha-1-microglobulin/bikunin precursor.
   
  
 0.743
AHSG
Alpha 2-HS glycoprotein.
   
 
 0.724
VTN
Vitronectin b.
   
  
 0.703
APOH
Apolipoprotein H.
   
 0.703
CP
Ceruloplasmin; Belongs to the multicopper oxidase family.
   
 0.689
LOC102347143
Uncharacterized protein.
   
 0.684
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
   
 0.667
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.634
FGG
Fibrinogen gamma chain.
   
 0.622
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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