STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZVR1_LATCHUncharacterized protein. (167 aa)    
Predicted Functional Partners:
AMBP
Alpha-1-microglobulin/bikunin precursor.
   
 
 0.741
AHSG
Alpha 2-HS glycoprotein.
   
  
 0.679
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
   
 0.632
LOC102347143
Uncharacterized protein.
   
 0.621
SERPINE3
Serpin family E member 3; Belongs to the serpin family.
   
 0.617
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.614
SERPINF2
Serpin family F member 2; Belongs to the serpin family.
   
 0.606
SERPINI1
Serpin family I member 1; Belongs to the serpin family.
   
 0.594
FGA
Fibrinogen alpha chain.
   
  0.583
SERPINE2
Serpin family E member 2; Belongs to the serpin family.
   
 0.576
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.