STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZVS2_LATCHUncharacterized protein. (258 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
  0.484
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.454
MYL5
Myosin light chain 5.
   
 0.454
LOC102346545
Myosin, light chain 12, genome duplicate 2.
   
 0.454
MYL7
Myosin light chain 7.
   
 0.454
MYL2
Myosin light chain 2.
   
 0.454
MYL9
Myosin light chain 9.
   
 0.454
H3BF30_LATCH
Uncharacterized protein.
   
 0.454
TNNT1
Troponin T1, slow skeletal type.
   
 0.447
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.447
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.