Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102353008Carbohydrate sulfotransferase. (256 aa)    
Predicted Functional Partners:
CHST9
Carbohydrate sulfotransferase.
  
 
 
0.909
CHST8
Carbohydrate sulfotransferase.
  
  
 
0.905
B4GALNT3
Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans.
     
  0.900
B4GALNT4
Hexosyltransferase.
     
  0.900
TMED2
Transmembrane p24 trafficking protein 2.
    
   0.547
LOC102360885
Luteinizing hormone, beta polypeptide.
     
  0.494
ACBD5
Acyl-CoA binding domain containing 5.
      
 0.472
CLIP3
CAP-Gly domain containing linker protein 3.
      
 0.467
H3AF26_LATCH
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
      
 0.459
TMED4
Transmembrane p24 trafficking protein 4.
    
   0.439
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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