STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POC5POC5 centriolar protein homolog (Chlamydomonas). (575 aa)    
Predicted Functional Partners:
CETN3
Centrin 3.
    
 
 0.993
LOC102364679
Centrin 4.
    
 
 0.980
WDR90
WD repeat domain 90.
    
 
 0.807
SPICE1
Spindle and centriole associated protein 1.
   
  
 0.800
TTLL11
Tubulin tyrosine ligase like 11.
      
 0.782
CFAP298
Cilia and flagella associated protein 298.
      
 0.750
IARS2
Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.689
CEP89
Centrosomal protein 89.
      
 0.686
CEP76
Centrosomal protein 76.
      
 0.685
KIF7
Kinesin family member 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.684
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.