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DHX57 protein (Latimeria chalumnae) - STRING interaction network
"DHX57" - DEAH in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX57DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 (1371 aa)    
Predicted Functional Partners:
PPIE
Peptidylprolyl isomerase E (cyclophilin E); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (302 aa)
     
  0.876
POLQ
Polymerase (DNA directed), theta (2256 aa)
   
  0.800
CDC40
Cell division cycle 40 homolog (S. cerevisiae) (574 aa)
     
  0.783
PRPF19
PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) (504 aa)
     
  0.781
PRPF8
PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) (2213 aa)
     
  0.780
HELQ
Helicase, POLQ-like (1039 aa)
     
  0.770
ENSLACG00000015253
Activating signal cointegrator 1 complex subunit 3 (1030 aa)
     
  0.765
SNRNP200
Small nuclear ribonucleoprotein 200kDa (U5) (1764 aa)
     
  0.765
BUD31
BUD31 homolog (S. cerevisiae) (238 aa)
     
  0.743
ASCC3
Activating signal cointegrator 1 complex subunit 3 (594 aa)
     
  0.741
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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