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BCKDHB protein (Latimeria chalumnae) - STRING interaction network
"BCKDHB" - Branched chain keto acid dehydrogenase E1, beta polypeptide in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCKDHBBranched chain keto acid dehydrogenase E1, beta polypeptide (217 aa)    
Predicted Functional Partners:
BCKDHA
Branched chain keto acid dehydrogenase E1, alpha polypeptide (446 aa)
  0.999
DBT
Dihydrolipoamide branched chain transacylase E2 (492 aa)
 
  0.998
PDHA1
Pyruvate dehydrogenase (lipoamide) alpha 1; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (400 aa)
  0.998
ENSLACG00000002134
Uncharacterized protein (236 aa)
   
  0.994
DLAT
Dihydrolipoamide S-acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (629 aa)
 
  0.972
PDHX
Pyruvate dehydrogenase complex, component X (534 aa)
 
  0.971
DLST
Dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) (458 aa)
 
  0.957
ENSLACG00000008435
Uncharacterized protein (233 aa)
   
  0.947
ENSLACG00000015905
L-lactate dehydrogenase (333 aa)
     
  0.941
ENSLACG00000010504
L-lactate dehydrogenase (362 aa)
     
  0.941
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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