STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPA1Carboxypeptidase A1. (779 aa)    
Predicted Functional Partners:
CARF
Calcium responsive transcription factor.
      
 0.689
ATP6V1B2
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
      
 0.673
SSBP4
Single stranded DNA binding protein 4.
      
 0.673
LOC102357388
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.612
LOC102347421
Zgc:112285; Belongs to the peptidase S1 family.
   
 
 0.612
H3AVZ6_LATCH
Uncharacterized protein; Belongs to the peptidase S1 family.
 
 
 
 0.612
LOC102354654
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.612
CTRC
Elastase 3 like; Belongs to the peptidase S1 family.
   
 
 0.612
LOC102355168
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.612
CELA1
Chymotrypsin like elastase 1; Belongs to the peptidase S1 family.
 
 
 
 0.612
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.