Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MEF2AMyocyte enhancer factor 2A. (468 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
    
 0.893
MYOD1
Myogenic factor.
    
 0.864
MEF2D
Myocyte enhancer factor 2D.
   
  0.863
MEF2B
Myocyte enhancer factor 2B.
    
 0.852
MAPK14
Mitogen-activated protein kinase.
    
 0.838
MAPK11
Mitogen-activated protein kinase.
    
 0.838
MYOG
Myogenin.
    
 0.804
LOC102352539
Uncharacterized protein.
   
 
 0.777
TBX20
T-box transcription factor 20.
    
 0.746
H3B8L2_LATCH
Protein kinase domain-containing protein.
    
 0.746
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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