STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAMDC2MAM domain containing 2. (421 aa)    
Predicted Functional Partners:
LOC102356571
MAM domain-containing protein.
 
     
0.900
FAM163A
Family with sequence similarity 163 member A.
      
 0.745
PTPRM
Protein tyrosine phosphatase receptor type M.
    
 0.696
H3AFZ6_LATCH
Fraser extracellular matrix complex subunit 1.
     
 0.570
PCSK2
Proprotein convertase subtilisin/kexin type 2.
   
  
 0.553
CCBE1
Collagen and calcium binding EGF domains 1.
    
 
 0.549
FRAS1
Uncharacterized protein.
     
 0.538
ANKRD66
Ankyrin repeat domain 66.
    
 0.506
PLA2G7
Platelet-activating factor acetylhydrolase.
      
 0.461
TRAPPC8
Uncharacterized protein.
      
 0.438
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.