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TRPV4 protein (Latimeria chalumnae) - STRING interaction network
"TRPV4" - Transient receptor potential cation channel, subfamily V, member 4 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPV4Transient receptor potential cation channel, subfamily V, member 4 (870 aa)    
Predicted Functional Partners:
TRPC1
Transient receptor potential cation channel, subfamily C, member 1 (793 aa)
     
   
  0.663
TRPM3
Transient receptor potential cation channel, subfamily M, member 3 (1326 aa)
           
  0.653
TRPM2
Transient receptor potential cation channel, subfamily M, member 2 (1473 aa)
           
  0.634
TRPC6
Transient receptor potential cation channel, subfamily C, member 6 (697 aa)
     
   
  0.518
TRPC4
Transient receptor potential cation channel, subfamily C, member 4 (760 aa)
     
   
  0.517
PKD2L2
Polycystic kidney disease 2-like 2 (589 aa)
           
  0.507
TRPC3
Transient receptor potential cation channel, subfamily C, member 3 (847 aa)
     
   
  0.488
TRPM8
Transient receptor potential cation channel, subfamily M, member 8 (1044 aa)
           
  0.481
PKD2
Polycystic kidney disease 2 (autosomal dominant) (890 aa)
           
  0.480
AGBL1
ATP/GTP binding protein-like 1 (995 aa)
     
      0.454
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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