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SS18L2 protein (Latimeria chalumnae) - STRING interaction network
"SS18L2" - Synovial sarcoma translocation gene on chromosome 18-like 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS18L2Synovial sarcoma translocation gene on chromosome 18-like 2 (79 aa)    
Predicted Functional Partners:
ACTL6A
Actin-like 6A (429 aa)
     
 
  0.595
ACTL6B
Actin-like 6B (406 aa)
     
 
  0.595
TSSK6
Testis-specific serine kinase 6 (269 aa)
     
   
  0.594
TAPBPL
TAP binding protein-like (448 aa)
           
  0.546
TSSK3
Testis-specific serine kinase 3 (266 aa)
     
   
  0.532
TSSK2
Testis-specific serine kinase 2 (348 aa)
     
   
  0.532
TSSK4
Testis-specific serine kinase 4 (368 aa)
     
   
  0.532
ACTL9
Actin-like 9 (369 aa)
     
 
  0.525
SHCBP1
SHC SH2-domain binding protein 1 (640 aa)
     
   
  0.520
HELLS
Helicase, lymphoid-specific (874 aa)
     
 
  0.495
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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