• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
ENSLACG00000001378 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001378" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001378Uncharacterized protein; Programmed cell death 4a (244 aa)    
Predicted Functional Partners:
CXXC4
CXXC finger protein 4 (291 aa)
           
  0.847
TOPORS
Topoisomerase I binding, arginine/serine-rich a (1037 aa)
           
  0.807
TET2
Tet methylcytosine dioxygenase 2 (2001 aa)
           
  0.806
ENSLACG00000000835
Uncharacterized protein; Methylthioadenosine phosphorylase (89 aa)
           
  0.800
EIF4A2
Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family (409 aa)
     
 
  0.783
ENSLACG00000004638
Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family (413 aa)
     
 
  0.783
EIF4A1
Eukaryotic translation initiation factor 4A, isoform 1B; Belongs to the DEAD box helicase family (407 aa)
     
 
  0.783
GMPS
Guanine monphosphate synthase (683 aa)
     
        0.749
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family (406 aa)
     
 
  0.637
PTEN
Phosphatase and tensin homolog (404 aa)
     
   
  0.634
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (13%) [HD]