STRINGSTRING
REEP5 protein (Latimeria chalumnae) - STRING interaction network
"REEP5" - Receptor accessory protein 5 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP5Receptor accessory protein 5 (189 aa)    
Predicted Functional Partners:
PFAS
Phosphoribosylformylglycinamidine synthase (1082 aa)
           
  0.769
RTN1
Reticulon 1 (680 aa)
     
   
  0.484
RTN4
Reticulon 4 (767 aa)
     
   
  0.483
RTN3
Reticulon 3 (227 aa)
     
   
  0.454
DDHD2
DDHD domain containing 2 (792 aa)
           
  0.454
SEC23IP
SEC23 interacting protein (956 aa)
           
  0.454
SLC25A46
Solute carrier family 25, member 46 (414 aa)
     
   
  0.446
ENSLACG00000016873
Uncharacterized protein (467 aa)
           
  0.429
ENSLACG00000010486
Uncharacterized protein (115 aa)
           
  0.429
YIPF5
Yip1 domain family, member 5 (276 aa)
       
 
  0.422
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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