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STRINGSTRING
REEP5 protein (Latimeria chalumnae) - STRING interaction network
"REEP5" - Receptor accessory protein 5 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP5Receptor accessory protein 5 (189 aa)    
Predicted Functional Partners:
RTN1
Reticulon 1 (680 aa)
     
 
  0.847
PFAS
Phosphoribosylformylglycinamidine synthase (1082 aa)
           
  0.831
SIL1
SIL1 nucleotide exchange factor (468 aa)
     
   
  0.782
MIA3
Uncharacterized protein; Melanoma inhibitory activity family, member 3 (834 aa)
     
   
  0.751
RTN4
Reticulon 4 (767 aa)
     
 
  0.715
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; SEC13 homolog (S. cerevisiae); Belongs to the WD repeat SEC13 family (320 aa)
     
   
  0.668
VAPA
VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (244 aa)
     
 
  0.662
YIPF5
Protein YIPF; Yip1 domain family, member 5 (276 aa)
     
 
  0.660
YIPF7
Protein YIPF; Yip1 domain family, member 7 (256 aa)
     
 
  0.660
ATL3
Atlastin 3 (520 aa)
     
   
  0.655
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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