STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC170Coiled-coil domain containing 170. (717 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.859
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.857
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.856
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.856
H3BCP3_LATCH
Uncharacterized protein.
    
 0.852
ARID4A
AT-rich interaction domain 4A.
    
 0.842
H2AZ2
Histone H2A; Belongs to the histone H2A family.
    
 0.816
ATPSCKMT
ATP synthase c subunit lysine N-methyltransferase.
    
 0.803
MEAF6
MYST/Esa1 associated factor 6.
    
 0.797
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
    
 
 0.793
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.