STRINGSTRING
CXXC1 protein (Latimeria chalumnae) - STRING interaction network
"CXXC1" - CXXC finger protein 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXXC1CXXC finger protein 1 (637 aa)    
Predicted Functional Partners:
WDR5B
WD repeat domain 5B (334 aa)
     
 
  0.965
RBBP5
Retinoblastoma binding protein 5 (494 aa)
     
 
  0.964
ASH2L
Ash2 (absent, small, or homeotic)-like (Drosophila) (448 aa)
     
 
  0.964
SETD1B
SET domain containing 1B (1979 aa)
     
 
  0.945
SETD1A
SET domain containing 1A (1677 aa)
     
 
  0.945
WDR82
WD repeat domain 82 (603 aa)
     
 
  0.906
WDR38
WD repeat domain 38 (293 aa)
     
 
  0.808
WDR64
WD repeat domain 64 (799 aa)
     
 
  0.779
WDR16
WD repeat domain 16 (740 aa)
     
 
  0.778
AMBRA1
Autophagy/beclin-1 regulator 1 (1195 aa)
     
 
  0.773
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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