STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CXXC1CXXC finger protein 1. (637 aa)    
Predicted Functional Partners:
WDR82
WD repeat domain 82.
   
 0.999
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
   
 0.997
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.997
WDR5B
WD repeat domain 5B.
    
 0.988
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.983
H3A4E9_LATCH
Uncharacterized protein.
   
 0.974
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.974
PIH1D1
Uncharacterized protein.
      
 0.922
HCFC2
Host cell factor C2.
   
 0.899
HCFC1
Host cell factor C1.
   
 0.899
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.