STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGFR1OPFGFR1 oncogene partner. (467 aa)    
Predicted Functional Partners:
CEP350
Centrosomal protein 350.
    
 
 0.902
LOC102350821
Serine/threonine-protein phosphatase.
    
 
 0.783
PPP2CA
Serine/threonine-protein phosphatase.
    
 
 0.783
PLK1
Serine/threonine-protein kinase PLK.
    
 0.752
CEP19
Centrosomal protein 19.
    
 
 0.743
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
    
 
 0.721
PLK3
Polo like kinase 3.
    
 0.590
PLK5
Serine/threonine-protein kinase PLK.
    
 0.590
PLK2
Serine/threonine-protein kinase PLK.
    
 0.590
LOC102364611
Uncharacterized protein; Belongs to the RNase T2 family.
      
 0.555
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.