CCDC86 protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

CCDC86

Uncharacterized protein. (356 aa)

Predicted Functional Partners:

MRTO4

0.743

NIP7

0.637

UFSP2

0.557

NHP2

0.540

GRWD1

0.533

NSA2

0.501

LYAR

0.482

TM2D1

0.474

APTX

0.474

LOC102351711

0.457

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APTX	CCDC86	ENSLACP00000003789	ENSLACP00000001557	Aprataxin.	Uncharacterized protein.	0.474
CCDC86	APTX	ENSLACP00000001557	ENSLACP00000003789	Uncharacterized protein.	Aprataxin.	0.474
CCDC86	GRWD1	ENSLACP00000001557	ENSLACP00000015329	Uncharacterized protein.	Glutamate rich WD repeat containing 1.	0.533
CCDC86	LOC102351711	ENSLACP00000001557	ENSLACP00000007036	Uncharacterized protein.	Coiled-coil domain containing 136b.	0.457
CCDC86	LYAR	ENSLACP00000001557	ENSLACP00000022226	Uncharacterized protein.	Ly1 antibody reactive.	0.482
CCDC86	MRTO4	ENSLACP00000001557	ENSLACP00000021797	Uncharacterized protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.743
CCDC86	NHP2	ENSLACP00000001557	ENSLACP00000019522	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.540
CCDC86	NIP7	ENSLACP00000001557	ENSLACP00000007436	Uncharacterized protein.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.637
CCDC86	NSA2	ENSLACP00000001557	ENSLACP00000004768	Uncharacterized protein.	NSA2 ribosome biogenesis factor.	0.501
CCDC86	TM2D1	ENSLACP00000001557	ENSLACP00000000502	Uncharacterized protein.	TM2 domain containing 1.	0.474
CCDC86	UFSP2	ENSLACP00000001557	ENSLACP00000003470	Uncharacterized protein.	UFM1 specific peptidase 2.	0.557
GRWD1	CCDC86	ENSLACP00000015329	ENSLACP00000001557	Glutamate rich WD repeat containing 1.	Uncharacterized protein.	0.533
GRWD1	LYAR	ENSLACP00000015329	ENSLACP00000022226	Glutamate rich WD repeat containing 1.	Ly1 antibody reactive.	0.871
GRWD1	MRTO4	ENSLACP00000015329	ENSLACP00000021797	Glutamate rich WD repeat containing 1.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.966
GRWD1	NHP2	ENSLACP00000015329	ENSLACP00000019522	Glutamate rich WD repeat containing 1.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.934
GRWD1	NIP7	ENSLACP00000015329	ENSLACP00000007436	Glutamate rich WD repeat containing 1.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.941
GRWD1	NSA2	ENSLACP00000015329	ENSLACP00000004768	Glutamate rich WD repeat containing 1.	NSA2 ribosome biogenesis factor.	0.531
LOC102351711	CCDC86	ENSLACP00000007036	ENSLACP00000001557	Coiled-coil domain containing 136b.	Uncharacterized protein.	0.457
LYAR	CCDC86	ENSLACP00000022226	ENSLACP00000001557	Ly1 antibody reactive.	Uncharacterized protein.	0.482
LYAR	GRWD1	ENSLACP00000022226	ENSLACP00000015329	Ly1 antibody reactive.	Glutamate rich WD repeat containing 1.	0.871