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CCDC86 protein (Latimeria chalumnae) - STRING interaction network
"CCDC86" - Coiled-coil domain containing 86 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC86Coiled-coil domain containing 86 (356 aa)    
Predicted Functional Partners:
NIP7
Nuclear import 7 homolog (S. cerevisiae); Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
        0.933
NSA2
NSA2 ribosome biogenesis homolog (S. cerevisiae) (260 aa)
     
      0.596
SH3BP5
SH3-domain binding protein 5 (BTK-associated) (278 aa)
           
  0.575
SLC44A1
Solute carrier family 44, member 1 (719 aa)
           
  0.572
SLC44A3
Solute carrier family 44, member 3 (660 aa)
           
  0.572
NHP2
NHP2 ribonucleoprotein homolog (yeast) (155 aa)
     
        0.470
MRTO4
mRNA turnover 4 homolog (S. cerevisiae) (238 aa)
     
        0.449
RRS1
RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) (329 aa)
     
        0.448
SH3BP5L
SH3-binding domain protein 5-like (259 aa)
           
  0.410
NHP2L1
NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (142 aa)
     
        0.406
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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