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SCAF8 protein (Latimeria chalumnae) - STRING interaction network
"SCAF8" - SR-related CTD-associated factor 8 in Latimeria chalumnae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAF8SR-related CTD-associated factor 8 (1071 aa)    
Predicted Functional Partners:
SETX
Senataxin (2165 aa)
     
 
  0.828
POLR3A
Polymerase (RNA) III (DNA directed) polypeptide A, 155kDa; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1355 aa)
     
 
  0.824
POLR2A
Polymerase (RNA) II (DNA directed) polypeptide A, 220kDa; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1920 aa)
     
 
  0.824
UBXN7
UBX domain protein 7 (505 aa)
     
 
  0.824
OXCT1
3-oxoacid CoA transferase 1; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate (530 aa)
       
      0.792
POLR1A
Polymerase (RNA) I polypeptide A, 194kDa; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (917 aa)
     
 
  0.753
ENSLACG00000002247
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (802 aa)
     
 
  0.753
PAPD5
PAP associated domain containing 5 (682 aa)
     
 
  0.705
HELZ2
Helicase with zinc finger 2, transcriptional coactivator (2883 aa)
     
 
  0.673
NCBP1
Nuclear cap binding protein subunit 1, 80kDa (804 aa)
       
      0.669
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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