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CLIP3 protein (Latimeria chalumnae) - STRING interaction network
"CLIP3" - CAP-GLY domain containing linker protein 3 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLIP3CAP-GLY domain containing linker protein 3 (536 aa)    
Predicted Functional Partners:
PAFAH1B1
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa); Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration (410 aa)
     
  0.666
DCTN4
Dynactin 4 (p62) (467 aa)
     
  0.645
DNAH1
Dynein, axonemal, heavy chain 1 (4245 aa)
     
  0.644
DNAH17
Dynein, axonemal, heavy chain 17 (4321 aa)
     
  0.644
DNAH10
Dynein, axonemal, heavy chain 10 (4600 aa)
     
  0.644
DNAH12
Dynein, axonemal, heavy chain 12 (2567 aa)
     
  0.644
DYNC1H1
Dynein, cytoplasmic 1, heavy chain 1 (4615 aa)
     
  0.644
ENSLACG00000011666
Uncharacterized protein (1141 aa)
     
  0.644
ENSLACG00000011044
Uncharacterized protein (3752 aa)
     
  0.644
DNAH6
Dynein, axonemal, heavy chain 6 (2400 aa)
     
  0.644
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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