STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNPEPAspartyl aminopeptidase; Belongs to the peptidase M18 family. (480 aa)    
Predicted Functional Partners:
NRDC
Nardilysin convertase; Belongs to the peptidase M16 family.
      
 0.840
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
   
  
 0.792
LOC102364748
Zgc:152830.
   
 
 0.769
MAN2C1
Mannosidase alpha class 2C member 1.
   
 
 0.756
RNPEP
Arginyl aminopeptidase.
   
  
 0.722
GTF2H1
General transcription factor IIH subunit 1.
    
   0.706
RNPEPL1
Arginyl aminopeptidase like 1.
   
  
 0.700
MPP1
Membrane palmitoylated protein 1; Belongs to the MAGUK family.
    
   0.686
ATG9B
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.680
ATG9A
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.680
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.