Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL6Oxysterol-binding protein; Belongs to the OSBP family. (384 aa)    
Predicted Functional Partners:
CCDC141
Coiled-coil domain containing 141.
      
 0.800
LRRC3C
Leucine rich repeat containing 3C.
      
 0.721
VAPB
VAMP associated protein B and C.
    
 
 0.661
GAK
J domain-containing protein.
   
 
 0.653
VAPA
VAMP associated protein A.
    
 
 0.561
LOC102361154
PWP2 small subunit processome component.
      
 0.548
MOSPD1
Motile sperm domain containing 1.
    
 
 0.521
APAF1
Apoptotic peptidase activating factor 1.
      
 0.513
CASP9
Caspase 9; Belongs to the peptidase C14A family.
      
 0.513
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 
 0.478
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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