STRINGSTRING
OSBPL6 protein (Latimeria chalumnae) - STRING interaction network
"OSBPL6" - Oxysterol binding protein-like 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL6Oxysterol binding protein-like 6 (384 aa)    
Predicted Functional Partners:
VAPB
VAMP (vesicle-associated membrane protein)-associated protein B and C (242 aa)
     
  0.842
VAPA
VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (244 aa)
     
  0.842
MIB1
Mindbomb E3 ubiquitin protein ligase 1 (989 aa)
     
 
  0.472
TMEM164
Transmembrane protein 164 (316 aa)
           
  0.408
ACTR2
ARP2 actin-related protein 2 homolog (yeast) (399 aa)
     
    0.407
ENSLACG00000002550
Uncharacterized protein (339 aa)
     
    0.407
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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